| Bioinformatics |
Discovery |
Linux |
Bayesian Inference of phylogeny |
| mrbayes |
Discovery |
Linux |
Complex and flexible comparative phylogeographic inference |
| Chemistry |
|
|
|
| autodock |
Discovery |
Linux |
Docking tools, Chemistry |
| Avogadro |
Discovery |
Linux |
Advanced molecular editor, Computational Chemistry |
| Babel |
Discovery |
Linux |
Chemical toolbox, required by Avogadro |
| CSDS |
Andes, Polaris |
Linux |
Cambridge Structural Database and tools |
| Gaussian |
Andes, Discovery |
Linux |
Computational Chemistry. Group license. |
| Jaguar |
Discovery |
Linux |
Ab initio electronic structure package |
| [jwhamp] (
https://rcweb.dartmouth.edu/public/downloads/jwhamp/) |
Linux, Windows, Mac |
Cold Plasma Simulation code |
|
| namd |
Discovery |
Linux |
Parallel Molecular Dynamics code for large biomolecular systems |
| nwchem |
Andes, Discovery |
Linux |
Electronic structure and molecular dynamics calculations |
| Qchem |
Discovery |
Linux |
Electronic Structure Calculations |
| Mathematics |
|
|
|
| [Maple] (
https://rcweb.dartmouth.edu/downloads/maple/) |
Andes, Polaris, Discovery |
Linux |
Mathematical and analytical software |
| [Mathematica] (
https://rcweb.dartmouth.edu/downloads/mathematica/) |
Andes, Polaris, Discovery |
Linux, Windows |
Mathematical and analytical software |
|
Matlab |
Andes, Polaris, Discovery |
Linux, Windows, Mac |
Mathematical and analytical software |
| Statistics |
|
|
|
| [JMP] (
https://rcweb.dartmouth.edu/downloads/jmp/) |
Windows, Mac |
Statistical software |
|
| R |
Andes, Polaris, Discovery |
Linux |
Statistics, data mining |
| R-mpi |
Discovery |
Linux |
Statistics, data mining |
| SAS |
Andes, Polaris, Desktop |
Linux, Windows |
Statistical Analysis Software |
| SPSS |
KeyServed |
Windows, Mac |
Statistical analysis. KeyServed concurrent licenses |
| Stata |
Andes, KeyServed |
Linux, Windows, Mac |
Statistical analysis. KeyServed concurrent licenses |
| Data Visualization and Graphics |
|
|
|
| ecce |
Polaris, Discovery |
Linux |
Computational Chemistry graphical interface to NWChem and Gaussian |
| gabedit |
Discovery |
Linux |
Graphical user interface to Computational Chemistry |
| visit |
Andes, Polaris, Discovery |
Linux |
Data analysis and visualization |
| paraview |
Andes, Polaris, Discovery |
Linux |
Data analysis and visualization |
| itk |
Discovery |
Linux |
Insight Toolkit Image Processing |
| idl |
Andes, Polaris, Discovery |
Linux |
Data analysis and Visualization |
| mgltools |
Discovery |
Linux |
Visualization and analysis of molecular structures |
| vmd |
Discovery |
Mac, Linux, Windows |
Visual Molecular Dynamics |
| Compilers |
|
|
|
| gfortran |
Andes, Polaris, Discovery |
Linux |
GNU Fortran Compilers |
| gcc |
Andes, Polaris, Discovery |
Linux |
GNU C compilers |
| Intel Compilers |
Andes, Polaris, Discovery |
Linux |
Fortran, C, and C++ compilers |
| PGI Compilers |
Discovery |
Linux |
High-performance computing software |
| Miscellaneous |
|
|
|
| [ESRI/ArcGIS] (
https://dartgo.org/esri-arcgis) |
Network License |
Windows |
Remote sensing/GIS |
| FormZ65 |
Windows, Mac |
Architectural design (Studio Arts Only) |
|
| LaTeX |
Discovery/Polaris/Andes |
Windows/Mac/Linux |
Typesetting and documents production |
| mplayer |
Discovery |
Linux |
Movie player for Linux |
| ompP |
Discovery |
Linux |
openMP profiler |
| Qt4 |
Discovery |
Linux |
Cross-platform development tool. Required by Avogadro |
| subversion |
Andes, Polaris, Discovery |
Linux |
Version control |
| TotalView |
Discovery, Andes, Polaris |
Linux |
Code debugger |
| Xwin32 |
Concurrent License |
Windows |
Connectivity |
| Linux Utilities |
|
|
|
| Ant |
Andes, Polaris, Discovery |
Linux |
Java-based build tool (make) |
| cmake |
Discovery |
Linux |
Linux build utility |
| mpiexec |
Discovery |
Linux |
MPI parallel job launcher |
| scons |
Polaris, Discovery |
Linux |
Make utility |